Paper Reviews
Papers I have studied closely: what they claim, how they show it, and what I take from them.
Conference Journal Other
Can You Trust This Prediction? Auditing Pointwise Reliability After Learning
Resampling Uncertainty Estimation asks a narrower, more auditable question than most uncertainty methods: not how confident is the model in general, but how much would this specific prediction have changed if the model had been fit on slightly different training data.
AISTATS 2019 September 5, 2026 Read →
Transparent Medical Image AI via an Image-Text Foundation Model Grounded in Medical Literature
MONET learns a dense, concept-scoring image-text space from 105,550 dermatology images paired with literature descriptions, then uses that space for data auditing, model auditing, and interpretation, including recovering a spurious redness-malignancy correlation that flipped sign between two hospitals.
Nature Medicine August 30, 2026 Read →
Robustness Stress Testing in Medical Image Classification
Progressive stress testing with five perturbation types at six severity levels, applied to chest X-ray and skin-lesion classifiers, separates iid test accuracy from robustness and finds that pretraining choice, not just architecture, shapes how a model degrades.
arXiv preprint August 23, 2026 Read →
Stress Testing Reveals Gaps in Clinic Readiness of Image-Based Diagnostic Artificial Intelligence Models
A skin-lesion classifier at dermatologist-level AUC gave false positive or negative predictions for up to 22% of lesions under a simple image rotation, a direct test of whether an acceptable benchmark score means the model is ready for a clinic.
npj Digital Medicine August 16, 2026 Read →
Concept Gradients: Concept-Based Interpretation Without Linear Assumption
TCAV assumes a concept occupies a linear direction in activation space. Concept Gradients drops that assumption and, in a medical case study, tracks concept importance scores against mortality-risk descriptions already published in the clinical literature.
ICLR 2023 August 10, 2026 Read →
The Medical Algorithmic Audit
A viewpoint proposing a structured audit process for deployed medical AI, treating shortcut learning, poor generalizability, and weak explainability as the three named failure modes an auditor should anticipate rather than discover by accident.
Lancet Digital Health August 4, 2026 Read →
Auditing the Inference Processes of Medical-Image Classifiers by Leveraging Generative AI and the Expertise of Physicians
Generative counterfactuals read by two blinded dermatologists across five academic and consumer skin-lesion classifiers, the closest published template I have found for the audit I want to run on ultrasound models.
Nature Biomedical Engineering July 28, 2026 Read →
Knee-xRAI: An Explainable AI Framework for Automatic Kellgren-Lawrence Grading of Knee Osteoarthritis
A framework built around the fact that a single-grade disagreement on the KL scale can redirect a patient from conservative therapy to a surgical pathway, explainability motivated directly by clinical stakes, not as a generic add-on.
arXiv preprint July 21, 2026 Read →
CLEAR: An Auditable Foundation Model for Radiology Grounded in Clinical Concepts
A foundation model trained on 0.87 million image-report pairs, built from the ground up around clinical-concept embeddings rather than bolting interpretability onto a black box afterward, auditability as a design constraint, not an add-on.
Nature Biomedical Engineering July 15, 2026 Read →
BI-RADS-Net: An Explainable Multitask Learning Approach for Cancer Diagnosis in Breast Ultrasound Images
A multitask model that predicts BI-RADS descriptors alongside malignancy, one of the earlier attempts at the same explainable-by-BI-RADS idea that later concept-bottleneck papers pushed further.
IEEE ISBI 2021 July 9, 2026 Read →
Weight Space Correlation Analysis: Quantifying Feature Utilization in Deep Learning Models
A method for detecting shortcut reliance by looking directly at correlations in a network's weight space, rather than at its activations or explanations, a different vantage point on the same underlying question.
MIDL 2026 July 2, 2026 Read →
Proposed International Clinical Diabetic Retinopathy and Diabetic Macular Edema Disease Severity Scales
The ICDR scale: a 31-person, 16-country consensus process behind the DR severity labels nearly every retinal AI paper trains against, built via a modified Delphi method rather than a single objective measurement.
Ophthalmology June 25, 2026 Read →
Multi-Resolution Tone Mapping for High Dynamic Range Medical Ultrasound Images
A tone-mapping method that expands ultrasound's usable dynamic range before a model, or a clinician, ever sees the image, quantified with real, measurable image-quality gains.
PLOS ONE June 19, 2026 Read →
Evaluating Shortcut Utilization in Deep Learning Disease Classification Through Counterfactual Analysis
A counterfactual-generation approach to quantifying shortcut reliance in disease classifiers, in the same spirit as RoentMod but framed as a general evaluation method rather than a modality-specific tool.
MIDL 2025 June 13, 2026 Read →
SilverLining: Data-First Mitigation of Spatial and Spectral Shortcuts Without Introducing New Confounders
A McIntosh-lab paper on fixing shortcuts at the data level (laterality markers, scanner noise) without the mitigation itself quietly introducing a new confounder, which the authors show is a real risk of naive data-level fixes.
WACV 2026 June 6, 2026 Read →
Automatic Grading of Individual Knee Osteoarthritis Features in Plain Radiographs Using Deep CNNs
Rather than predicting a single aggregate KL grade, this model grades each individual OARSI-atlas feature (osteophytes, joint space narrowing, and more) separately, matching the atlas's own granularity.
Scientific Reports May 30, 2026 Read →
On the Existence of Simpler Machine Learning Models
The Rashomon-set argument: for a given dataset, there are often many equally accurate models, some far simpler and more interpretable than others, so 'we needed the complex model for accuracy' is a claim that should be checked, not assumed.
ACM FAccT 2022 May 24, 2026 Read →
Shortcut Learning in Medical AI Hinders Generalization: Method for Estimating AI Model Generalization Without External Data
A study showing that models can achieve high internal accuracy by exploiting signals tied to how and where data were collected, and lose that performance when transferred elsewhere.
npj Digital Medicine May 18, 2026 Read →
Interpretations Are Useful: Penalizing Explanations to Align Neural Networks with Prior Knowledge
CDEP, penalizing a model's contextual-decomposition-based explanation directly during training, so an explanation isn't just a diagnostic afterward but an actionable lever to fix the model.
ICML 2020 May 11, 2026 Read →
Detection of Lesions in Retina Photographs Based on the Wavelet Transform
An early, template-based method for finding microaneurysms, the first and smallest lesions of diabetic retinopathy, using wavelet-domain matching rather than a learned classifier.
IEEE EMBS 2006 May 4, 2026 Read →
Ensuring Medical AI Safety: Interpretability-Driven Detection and Mitigation of Spurious Model Behavior and Associated Data
A framework connecting interpretability directly to correction: find the spurious behavior with concept-level explanation methods, then fix both the model and the data it came from.
Machine Learning April 28, 2026 Read →
Quantitative Ultrasound Analysis for Classification of BI-RADS Category 3 Breast Masses
A CAD system targeted specifically at the ambiguous BI-RADS category 3, 'probably benign' masses, testing whether quantitative features can safely reclassify malignant cases that radiologists had grouped as low-risk.
Journal of Digital Imaging April 22, 2026 Read →
Knee Images Digital Analysis (KIDA): A Novel Method to Quantify Individual Radiographic Features of Knee Osteoarthritis in Detail
A pre-deep-learning digital measurement system for knee-OA radiographic features, a reminder that 'objective, automated quantification' of joint space and osteophytes predates neural networks by well over a decade.
Osteoarthritis and Cartilage April 15, 2026 Read →
Medical Image Segmentation Based on Frequency Domain Decomposition SVD Linear Attention
A frequency-domain attention module built to recover the high-frequency texture and boundary information that Vision Transformer segmentation models tend to lose, directly relevant to any medical target defined by fine texture or a sharp boundary.
Scientific Reports April 8, 2026 Read →
Learning Causal Alignment for Reliable Disease Diagnosis
A causal framing of the shortcut-learning problem in disease diagnosis, trying to explicitly align a model's learned representation with the causal structure of disease, not just penalize known spurious features after the fact.
ICLR 2025 April 2, 2026 Read →
There Are No Shortcuts to Anywhere Worth Going: Identifying Shortcuts in Deep Learning Models for Medical Image Analysis
A method for locating which layer of a network a shortcut's features actually manifest in, using Prediction Depth and KL divergence, moving from 'the model has a shortcut' to 'here is where in the network it lives.'
MIDL 2024 March 27, 2026 Read →
Covariate-Adjusted Spearman's Rank Correlation with Probability-Scale Residuals
A statistics paper on adjusting rank correlation for confounding covariates, read because so many AI-versus-classical-index comparisons in medical imaging report raw Spearman correlation without asking whether a shared confound is inflating it.
Biometrics March 20, 2026 Read →
Assessing the Trustworthiness of Saliency Maps for Localizing Abnormalities in Medical Imaging
Radiology-specific saliency evaluation: sanity checks and human-alignment tests applied directly to chest radiograph localization tasks.
Radiology: Artificial Intelligence March 13, 2026 Read →
Diabetic Retinopathy Preferred Practice Pattern
The clinical practice guideline that defines how diabetic retinopathy is actually meant to be screened, staged, and managed, the standard any AI screening tool is ultimately deployed to support, not replace.
American Academy of Ophthalmology March 7, 2026 Read →
CANet: Cross-Disease Attention Network for Joint Diabetic Retinopathy and Diabetic Macular Edema Grading
Joint grading of two correlated diabetic-eye diseases via cross-disease attention, a structural bet that shared retinal evidence should inform both diagnoses at once, rather than training two separate classifiers that never talk to each other.
IEEE TMI March 1, 2026 Read →
Breast Tumor Classification of Ultrasound Images Using Wavelet-Based Channel Energy and ImageJ
A pre-deep-learning approach to breast-ultrasound CAD: hand-engineered wavelet channel-energy features meant to capture how infiltrative a lesion's margin looks, a useful reminder of what feature engineering used to make explicit.
IEEE JSTSP February 22, 2026 Read →
Post hoc Explanations May Be Ineffective for Detecting Unknown Spurious Correlation
A sobering stress test of the exact interpretability toolkit I lean on elsewhere in this collection (feature attribution, concept activation, and training-point ranking) against spurious signals the practitioner doesn't already know to look for.
ICLR 2022 February 15, 2026 Read →
Underspecification Presents Challenges for Credibility in Modern Machine Learning
Two models with identical training accuracy, identical architecture, and different random seeds can behave completely differently under distribution shift, a Google-scale audit of just how common this is, including in a dermatology model.
JMLR February 9, 2026 Read →
Right for the Right Reasons: Training Differentiable Models by Constraining Their Explanations
A clinical asthma-and-pneumonia case study opens this paper: a model that learned asthma predicts lower readmission risk, backwards from reality, because of how the training data was collected, and a method to penalize a model for explaining itself that way.
IJCAI 2017 February 3, 2026 Read →
On Calibration of Modern Neural Networks
Modern networks are more accurate and less calibrated than their predecessors, and the fix (temperature scaling) is almost embarrassingly simple.
ICML January 27, 2026 Read →
Regression Concept Vectors for Bidirectional Explanations in Histopathology
An extension of TCAV to continuous, graded concepts: used to show that nuclei texture, not just its presence, is a directional driver of tumor-grade predictions in lymph-node histopathology.
MICCAI 2018 Workshop January 20, 2026 Read →
Noninvasive Quantitative Estimation of Hepatic Steatosis by Ultrasound: A Comparison of the Hepato-Renal Index and Ultrasound Attenuation Index
A head-to-head comparison of two classical ultrasound-based liver-fat indices in living liver-donor candidates, against biopsy, the pair of legible baselines that any liver-steatosis deep model is implicitly competing with.
Medical Ultrasonography January 14, 2026 Read →
BUS-BRA: A Breast Ultrasound Dataset for Assessing Computer-Aided Diagnosis Systems
A biopsy-proven, multi-scanner breast ultrasound dataset with standardized cross-validation partitions, the kind of dataset-hygiene paper that makes fair benchmark comparisons possible in the first place.
Medical Physics January 8, 2026 Read →
Grad-CAM: Visual Explanations from Deep Networks via Gradient-Based Localization
The saliency method almost every medical-imaging paper cites, and a good place to be precise about what its heatmap actually certifies.
ICCV January 1, 2026 Read →
US Attenuation for Liver Fat Quantification: An AIUM-RSNA QIBA Pulse-Echo Quantitative Ultrasound Initiative
A standards-body review on turning ultrasound attenuation and backscatter into a quantitative, reproducible liver-fat biomarker, the standardization work that any AI liver-steatosis model eventually has to sit on top of.
Radiology December 25, 2025 Read →
EyePACS Digital Retinal Image Grading Protocol
The internal grading manual behind the EyePACS diabetic-retinopathy dataset, the lesion-by-lesion rulebook that every EyePACS-trained DR model's labels ultimately trace back to.
EyePACS Grading Protocol December 19, 2025 Read →
Underdiagnosis Bias of Artificial Intelligence Algorithms Applied to Chest Radiographs in Under-Served Patient Populations
Chest X-ray classifiers assigned 'no finding' disproportionately to underserved patients, the error mode that silently denies care.
Nature Medicine December 13, 2025 Read →
RoentMod: A Synthetic Chest X-Ray Modification Model to Identify and Correct Image Interpretation Model Shortcuts
A counterfactual image-editing model that inserts or removes a chest X-ray finding without retraining the classifier under test: used to catch models exploiting institutional, demographic, and device markers as shortcuts.
npj Digital Medicine December 6, 2025 Read →
Concept Bottleneck Models
The paper that named and formalized the concept bottleneck: asking, using the paper's own example, whether a model would still predict severe arthritis if it didn't think there was a bone spur.
ICML 2020 November 29, 2025 Read →
Superiority of Multiple-Joint Space Width over Minimum-Joint Space Width Approach in the Machine Learning for Radiographic Severity and Knee Osteoarthritis Progression
ResU-Net segmentation feeding 64-point multi-JSW measurements into XGBoost, outperforming the conventional single minimum-JSW pipeline for predicting knee-OA severity and progression, with the segmentation itself validated against a radiologist.
Biology (MDPI) November 23, 2025 Read →
BI-RADS for Sonography: Positive and Negative Predictive Values of Sonographic Features
An empirical look at how well individual BI-RADS sonographic descriptors actually predict malignancy, the kind of per-feature grounding that a BI-RADS-based concept bottleneck for breast ultrasound is implicitly relying on.
AJR November 17, 2025 Read →
Hidden Stratification Causes Clinically Meaningful Failures in Machine Learning for Medical Imaging
Within a labeled class there are clinically distinct subsets, and a model can fail on the dangerous ones while the headline number stays high.
ACM CHIL November 10, 2025 Read →
Transfer Learning with Deep Convolutional Neural Network for Liver Steatosis Assessment in Ultrasound Images
A transfer-learning pipeline for grading liver steatosis from B-mode ultrasound, benchmarked directly against the hepatorenal index and GLCM texture features, with biopsy as the reference standard.
IJCARS November 3, 2025 Read →
AI for Radiographic COVID-19 Detection Selects Shortcuts Over Signal
During a pandemic, dozens of high-accuracy COVID detectors were published. This paper showed many were reading laterality markers, patient positioning, and dataset provenance.
Nature Machine Intelligence October 28, 2025 Read →
Learning a Clinically-Relevant Concept Bottleneck for Lesion Detection in Breast Ultrasound
A concept bottleneck that predicts BI-RADS features before the final cancer classification, and shows that letting a radiologist correct the intermediate concepts actually improves the final diagnosis.
MICCAI 2024 October 22, 2025 Read →
Classifications in Brief: Kellgren-Lawrence Classification of Osteoarthritis
A short clinical primer on the KL grading scale, the single most common label target for knee-OA deep learning papers, and a reminder of how much subjectivity that five-point scale is quietly absorbing.
Clinical Orthopaedics and Related Research October 15, 2025 Read →
Detecting Shortcut Learning for Fair Medical AI Using Shortcut Testing
A method (ShorT) for directly testing whether a clinical model is using shortcut correlations, with the uncomfortable finding that shortcuts are not always the reason a model is unfair.
Nature Communications October 8, 2025 Read →
Variable Generalization Performance of a Deep Learning Model to Detect Pneumonia in Chest Radiographs: A Cross-Sectional Study
CNNs detected the treating institution from chest radiographs and used it as a proxy for disease prevalence, an early, concrete demonstration of confounding by site.
PLOS Medicine October 2, 2025 Read →
Ultrasonographic Fatty Liver Indicator, a Novel Score Which Rules Out NASH and Is Correlated with Metabolic Parameters in NAFLD
A hand-crafted, semi-quantitative ultrasound score (US-FLI) built from four visual features, the kind of clinically legible scoring system that a learned model in the same space should be able to match or explain, not just outperform.
Liver International September 26, 2025 Read →
Interpretability Beyond Feature Attribution: Quantitative Testing with Concept Activation Vectors (TCAV)
TCAV asks whether a model's prediction is sensitive to a human-named concept, such as 'striped' or 'malignant,' rather than to a single pixel, the tool that later work on shortcut detection in medical imaging builds directly on.
ICML 2018 September 19, 2025 Read →
Atlas of Individual Radiographic Features in Osteoarthritis, Revised
The OARSI atlas that turns joint-space narrowing, osteophytes, and sclerosis into graded reference images, the ground truth that any automated knee-OA grader is ultimately trying to reproduce.
Osteoarthritis and Cartilage September 12, 2025 Read →
Shortcut Learning in Deep Neural Networks
The paper that gave the field a shared vocabulary for models that solve the benchmark without solving the task.
Nature Machine Intelligence September 6, 2025 Read →